First off, I think that daimyo was not exactly a title during the Sengoku period, but rather a research term used to describe the powerful warriors of this era controlling large land; specifically, you’d typically use the term Sengoku daimyō to differentiate from preceding usages of the term. At its core, it doesn’t really mean more than “someone in whose possession are many myōden (named fields).” During the early medieval period, the word was simply used to denote a powerful warrior. (Likewise, samurai didn’t really indicate a specific status before the Edo period either.)

Now, to come to the main question.

Was there a system of titles for the “nobility”?

Yes, several. I will give the large frame or reference first, into which warrior government later fell; however, my specialty is the early medieval period (until ca. the 14th century), so I would kindly ask u/ParallelPain (or others who might be qualified) to, if he finds the time, describe the developments and situation shortly before and within the Sengoku period a bit better than I could possibly do.

1. The Imperial Court Aristocracy

The imperial court, who provided the main frame of reference for society during premodern times, was originally created by incorporating many local chieftains, transforming them into nobility. These chieftains had received titles, which we call kabane; but most of these old lineages either died out or became rather irrelevant over time and were supplanted by more recent ones, of which the Fujiwara, Tachibana, and the Minamoto and Taira lineages were the most important. The latter two are lineage names given to people of imperial descent who stopped being royalty. In sum, the kabane became rather inconsequential pretty quickly, but survived, to a minor extent, as a kind of indication of noble heritage.

Instead, the imperial court introduced a system of ranks and offices modelled after T’ang China. There were four ranks for royal princes(ses), several for Buddhist monks, and, most importantly, nine (with up to four subdivisions each) ranks for the court aristocracy who staffed the imperial ministries. In practice, the last three of these nine ranks became irrelevant over the course of the Heian period (i.e., until the end of the twelfth century). Simply put, the top three ranks denoted the high aristocracy, the fourth and fifth ranks people who had audience rights within the imperial court, the sixth the lowest stratum who mostly fulfilled roles like scribes, doctors, musicians, supporting staff within the imperial guard and provincial staff, of whom many came to be professional warriors.

Again, over the course of the medieval period, a lot of these offices (except the lowest ones which were always a denoting real “job”) became devoid of actual function, which is especially the case with provincial governorships (more on those later). We can also see many warriors, later on, being appointed to a variety of offices, especially things like “master of the stables,” “captain of the imperial gate guard,” “police constable,” despite almost never setting foot into the capital.

Aristocrats rose through the ranks during the course of their lives, with rather fixed career paths emerging (first serve a few years as governor, then become part of the minister of state, things like that), with their starting rank and the highest rank they could rise up to being determined by their lineage (i.e., if neither your father nor grandfather was minister of the state, you could never be one—unless you did something extremely exceptional).

To summarize, the imperial aristocracy defined the aristocracy by a system of ranks and offices, with the early idea of “titles” losing significance relatively quickly; the rank was indicative of the social stratum one belonged to. The idea of a “feudal, landed nobility” did not exist.

2. Provincial Government

Japan was divided into several provinces. Aristocrats were appointed as tenured governors of these provinces for several years. Over the course of the Heian period, the idea of absentee governorships emerged: an agent was dispatched as a deputy governor instead. We can see this as part of a general trend of separation between the imperial capital and “the countryside.”

With the tenth century, the concept of estates was also introduced: tax-free, privileged lands which were not under control of the imperial administration, but under that of Buddhist monasteries, shrines, and individual court aristocrats directly. This carved niches of semi-private property into the state lands (and coffers); managers of these estates were appointed by the respective proprietors. The social structure of estates became the defining element of medieval society (the medieval period is typically defined to span the later Heian period, from ca. the eleventh century, up to the beginning of the Edo period), with the provincial governorships administrative structure being managed similarly.

Roughly at the same time, professional warriors arose in the provinces. Many of them served as officials within estates, districts (subdivisions of provinces), and provincial local government; these lower provincial posts often became de facto hereditary (no one would bother trying to replace you unless you’d be so stupid as to become a criminal such as a bandit or pirate).

In sum, provincial governance was originally under the supervision of imperial aristocrats dispatched from the capital and a local residential staff of subordinate officials, plus officials on semi-privatized estates, the latter of which formed the basis of medieval society.

Yes there were hierarchies.

A local daimyō roughly had the following hierarchy. To crib from the Kōyō Gunkan for the Takeda Clan

Goichimon or Shinrui - The daimyō's relations, close or distant relatives or those by marriage. For Takeda Harunobu (Shingen) this included (among others) his brother Nobushige, his heir Katsuyori, branch families like the Anayama, and younger sons that were given enheritence of conquered clans like the Nishina, and marriage ties like Kisō and Mochizuki.

Fudai - The families that had served the daimyō for generations, such as the Baba, Naitō, Yamagata, Akiyama, Hara, Oyamada, etc for the Takeda clan.

Usually the head of the goichimon and fudai families ran the leadership of the clan, along with the daimyō himself of course.

Tozama - Conquered, surrendered, or otherwise brought under the daimyō's leadership in more recent times. They were to extend the clan's will to their own territories and provide troops when called upon. These were divided into their locales, for the Takeda there were the lords of Shinano, Western Kōzuke, Suruga, Tōtomi-Mikawa, Hida, Ecchū, Musashi, and a group of pirates.

Hatamoto - The samurai, including the Ashigaru daishō (captains), and their men who reported directly to the daimyō in battle and served as his guards.

Bugyō - The samurai and their men who operated as the daimyō's direct bureaucrats like doing paperwork and overseeing his lands.

When the Edo bakufu and domain was formed, this was the system (and basically the terms) they used.

And then there are some men assigned to his heir and wives.

Then there's a completely separate hierarchy based on the Muromachi Bakufu's own hierarchy. Besides the shōgun, there was the kanrei, which was the highest position after the shōgun. Underneath them, for the administration, the Muromachi inherited the Kamakura's system of governance, with the hyōjōshū and the hikitsuke underneath them taking care of the judiciary and hearly lawsuits, mandokoro in charge of the Bakufu's finances and overseeing the direct realms, samurai dokoro that were supposed to oversee the samurai and military affairs, and monchūjo who (unlike their kamakura counterpart) mainly did the record keeping.

The provinces were supposed to be ruled by the shugo. In the Kamakura the shugo only had the responsibility of policing and military, but in the Muromachi it their power grew to become basically ruler of the province. They oversaw the jitō, the samurai of the provinces who ran things at the local level. Often the shugo were required to live in Kyōto or Kamakura, leaving their deputies, the shugodai, the ones to run the provinces. Important areas like Kyūshū and the provinces of Mutsu and Dewa were assigned tandai to oversee the entire region. Other area might be given to Ashikaga offsprings, groups that were called kubō. The most important was the Kamakura kubō, who was supposed to oversee the Kantō plains, an area so important that he got his own kanrei, the kantō kanrei. The kantō kanrei and the Kamakura kubō turning on each other contributed greatly to the outbreak of the Sengoku. During the Sengoku, the shugodai and the shugo turning on each other was also a common occurrence, part of a process called gekokujō, or "the lower overcoming the higher".

One final hierarchy existed in the form of the remnants of the ritsuryō titles from Classical Japan. These were positions (minister, first & second assistant, officers, etc) in the Ministries of the Center, Civil Services, Ceremonies, Popular Affairs, War, Justice, Treasury, and Imperial Household, the Imperial Guards, danjōdai (censor/police), and many others. The provinces were supposed to be ran by the kokushi. Parallel to these were also nine court ranks, each further divided into junior and senior ranks. One was supposed to hold a position and its accompanying rank.

By the Sengoku, the court ranks were only titles and few (or perhaps none) actually had the manpower, resources, or authority to carry out their original tasks, and indeed many positions went officially unfilled (including the official "Empress"). Likewise the Bakufu positions also fell into disarray, though important titles like the kanrei continued to be filled (and fought over). However, the titles themselves still had enough authority and prestige that they were covetted by all. It was really common for daimyōs to do political favours for the bakufu in return for official appointments. When the bakufu asked Takeda Harunobu to make peace with Nagao Kagetora (later Uesugi Kenshin) in the late 1550s for instance, Harunobu agreed on the condition he be officially recognized as the shugo of Shinano which he had spent close to 20 years conquering. Tokugawa Ieyasu likewise officially requested from the court and was granted the position of kokushi of Mikawa.

Even when official recognition was lacking, samurai still like to style themselves and their followers based on (usually) the ritsuryō titles, leading to a lot of -kami (kokushi), -danjō (censor), -emon (Imperial guard).